Environment & Ecology Ecology and Ecosystems GS Paper III

Ecosystems: Structure, Energy Flow and Nutrient Cycles

Ecosystem structure and function for UPSC: productivity, food chains, the ten per cent law, ecological pyramids, succession, nutrient cycles and species interactions.

SyllabusGS III · General issues on environmental ecology, biodiversity and climate change that do not require subject specialisation

By 13 min read Updated Oct 2026 #environment#ecology#ecosystem

Prerequisites: Ecology and Ecosystems — overview · Biogeography and Soils

The Hook: What Happens When the Wolves Come Back?

Connect: In the News → Concept

Grey wolves had been eliminated from Yellowstone National Park in the United States by the early twentieth century. In 1995 they were reintroduced. Over the following years researchers reported that elk changed how and where they grazed, and that willow and aspen along some streams began to recover. Ecologists still debate how strong this effect was, but the episode became the best-known illustration of a trophic cascade: a change at the top of a food chain rippling down to plants, rivers and other animals.

The question it raises is the question this chapter answers: how are the living and non-living parts of an ecosystem connected, so that removing or restoring one species can change the whole system?

The Core Concept

An ecosystem is a functional unit of nature in which living organisms interact with each other and with their physical environment. The term was coined by the British ecologist A.G. Tansley in 1935. Every ecosystem has a structure (what it is made of) and functions (what it does).

Structure: biotic and abiotic components

ComponentExamplesRole
AbioticSunlight, temperature, water, soil, minerals, gasesPhysical and chemical setting; inorganic nutrients
Producers (autotrophs)Green plants, phytoplankton, cyanobacteriaFix solar energy through photosynthesis
Consumers (heterotrophs)Herbivores (primary), carnivores (secondary, tertiary), omnivoresObtain energy by eating other organisms
DecomposersBacteria, fungiBreak down dead organic matter and release nutrients

Each step in the feeding sequence is a trophic level: producers form the first, herbivores the second, and so on.

Function 1: Productivity

  • Gross primary productivity (GPP) is the rate at which producers fix organic matter during photosynthesis.
  • Net primary productivity (NPP) = GPP minus respiration losses (R). NPP is what is available to herbivores and decomposers.
  • Secondary productivity is the rate at which consumers form new organic matter.

Only a small share of sunlight becomes plant matter. NCERT Biology (Class XII) notes that less than 50% of incident solar radiation is photosynthetically active radiation (PAR), and plants capture only about 2–10% of the PAR.

Productivity depends on light, temperature, water and nutrients. Per unit area, tropical rainforests, coral reefs, estuaries and marshes are highly productive; deserts and the open ocean are among the least. NCERT notes that oceans, despite covering about 70% of the Earth’s surface, contribute only around a third of the biosphere’s annual net primary productivity.

Function 2: Decomposition

Decomposition breaks complex organic matter (detritus) into inorganic substances. NCERT lists five steps:

  1. Fragmentation — detritivores such as earthworms break detritus into smaller particles.
  2. Leaching — water-soluble nutrients move down into the soil and may form unavailable salts.
  3. Catabolism — bacterial and fungal enzymes break detritus into simpler inorganic substances.
  4. Humification — formation of humus, a dark, amorphous substance highly resistant to microbial action, which decomposes very slowly.
  5. Mineralisation — humus is further degraded and inorganic nutrients are released.

Decomposition is fastest in warm, moist, oxygen-rich conditions with detritus rich in nitrogen and sugars; it slows in cold, dry or waterlogged conditions and with detritus rich in lignin and chitin. That is why organic matter accumulates in bogs and peatlands.

Function 3: Energy flow and the ten per cent law

Energy flows one way: sun → producers → consumers → decomposers, and leaves the system as heat. It is never recycled. The American ecologist Raymond Lindeman (1942) showed that only about 10% of the energy at one trophic level is transferred to the next; the rest is lost mainly through respiration as heat. This is why food chains rarely exceed four or five levels.

Food chainStarts withWhere it dominates
Grazing food chain (GFC)Living producers eaten by herbivoresAquatic ecosystems — the major conduit of energy flow
Detritus food chain (DFC)Dead organic matter eaten by decomposers and detritivoresTerrestrial ecosystems such as forests — a larger share of energy flows through it

Food chains interlink to form a food web, which makes an ecosystem more stable: if one prey species declines, a predator can switch to another.

Function 4: Ecological pyramids

PyramidCan it be inverted?Classic example
NumberYesA single tree supporting thousands of insects; parasite chains
BiomassYesIn the sea, the standing biomass of fish can exceed that of phytoplankton, because phytoplankton reproduce very fast
EnergyNeverEnergy always decreases up the levels (second law of thermodynamics)

Pyramids ignore species that occupy more than one trophic level, and they do not include decomposers, even though decomposers handle much of the energy.

Function 5: Nutrient cycling (biogeochemical cycles)

Unlike energy, nutrients are recycled. Cycles are of two types:

  • Gaseous cycles — the reservoir is the atmosphere (and ocean): carbon, nitrogen, oxygen.
  • Sedimentary cycles — the reservoir is the Earth’s crust: phosphorus, sulphur, calcium. Phosphorus has no significant gaseous phase.

Carbon: NCERT notes that about 71% of carbon is dissolved in the oceans, which regulate atmospheric carbon dioxide. Photosynthesis removes carbon dioxide; respiration, decomposition, burning of fossil fuels and forest fires return it.

Nitrogen is the cycle Prelims tests most:

StepWhat happensOrganisms (examples)
Nitrogen fixationAtmospheric N₂ converted to ammoniaRhizobium (root nodules of legumes), Azotobacter (free-living), cyanobacteria such as Anabaena and Nostoc, Frankia (non-legumes such as alder); also lightning and the industrial Haber–Bosch process
AmmonificationDead organic nitrogen converted to ammoniaDecomposer bacteria and fungi
NitrificationAmmonia → nitrite → nitrateNitrosomonas (to nitrite), Nitrobacter (to nitrate)
DenitrificationNitrate converted back to N₂ gasPseudomonas, Thiobacillus
graph LR
    A[Atmospheric nitrogen] -->|Fixation: Rhizobium, cyanobacteria, lightning| B[Ammonia]
    B -->|Nitrosomonas| C[Nitrite]
    C -->|Nitrobacter| D[Nitrate]
    D -->|Absorbed by plants| E[Plant and animal proteins]
    E -->|Ammonification by decomposers| B
    D -->|Denitrification: Pseudomonas| A

Ecological succession

Succession is the gradual, fairly predictable change in species composition of an area until a stable climax community develops. The series of stages is a sere; each stage is a seral stage.

TypeStarts onPaceExample
PrimaryBare area with no soil (rock, new lava, sand dune)Very slow — soil must form firstLichens on bare rock
SecondaryArea where life was destroyed but soil remains (abandoned farm, burnt forest, cleared land)FasterGrasses and shrubs on abandoned fields
  • Xerarch succession starts in dry areas; the pioneers on rock are usually lichens, which secrete acids that help weather rock into soil, followed by mosses, herbs, shrubs and trees.
  • Hydrarch succession starts in water; pioneers are phytoplankton, followed by submerged and floating plants, reed swamp, marsh meadow, shrubs and trees.
  • Both move towards mesic (medium-moisture) conditions.

Species interactions

InteractionSpecies ASpecies BExample
Mutualism++Lichens (fungus and alga); mycorrhiza; fig and fig wasp
Commensalism+0Orchid growing as an epiphyte on a mango branch; barnacles on a whale
Amensalism−0Penicillium secreting a substance that inhibits bacteria
Parasitism+−Cuscuta on host plants; brood parasitism by the cuckoo
Predation+−Tiger and deer
Competition−−Two species using the same limited resource

Gause’s competitive exclusion principle: two closely related species competing for the same limiting resource cannot coexist indefinitely; the weaker one is eliminated. In nature, species often avoid this through resource partitioning.

Concepts that look alike

  • Habitat — the physical place where an organism lives (its “address”).
  • Ecological niche — the functional role of a species: what it eats, when it is active, how it uses resources (its “profession”).
  • Ecotone — a transition zone between two ecosystems, such as a mangrove (land and sea), an estuary (river and sea) or a forest–grassland boundary.
  • Edge effect — the tendency for an ecotone to hold more species, and sometimes higher density, than either adjoining ecosystem. Species found mainly at edges are edge species.
  • Keystone species — a species whose impact on its community is far larger than its abundance suggests. The idea comes from Robert Paine’s experiments with the starfish Pisaster on the Pacific coast of the United States in the 1960s: removing the predator let mussels take over and diversity fell.
  • Indicator species — species whose presence or absence signals environmental conditions; lichens are sensitive to sulphur dioxide and are used as air-pollution indicators.
  • Flagship species — charismatic species used to rally public support (the tiger). Umbrella species — species whose protection protects many others sharing its habitat.

Population growth

  • Exponential (J-shaped) growth — when resources are unlimited.
  • Logistic (S-shaped) growth — growth slows as the population approaches the carrying capacity (K) of the environment. NCERT calls this the Verhulst–Pearl logistic growth.
  • r-selected species produce many small offspring with little parental care (insects, many fish); K-selected species produce few offspring with high parental care (elephants, humans).

Memory Anchors

Five steps of decomposition: “Five Lazy Cows Hate Mud” → Fragmentation · Leaching · Catabolism · Humification · Mineralisation

Nitrification order: “So Must Be” — Nitrosomonas comes before Nitrobacter (ammonia → nitrite → nitrate).

Pyramids: “Energy never stands on its head.” Number and biomass can be inverted; energy cannot.

Comparison table — the three look-alikes

TermOne-line meaning
HabitatWhere a species lives
NicheWhat a species does there
EcotoneWhere two ecosystems meet

One-line Mains hook: “Energy flows, nutrients cycle” — the two laws of every ecosystem, and the reason pollution that blocks a cycle or a species that breaks a chain has system-wide effects.

For Prelims

Facts worth a mark
  • “Ecosystem” was coined by A.G. Tansley (1935); the ten per cent law is associated with Raymond Lindeman (1942).
  • NPP = GPP − respiration. Only about 2–10% of photosynthetically active radiation is captured by plants (NCERT).
  • In aquatic ecosystems the grazing food chain is the main energy pathway; in terrestrial ecosystems more energy flows through the detritus food chain (NCERT).
  • The pyramid of energy is always upright; the pyramid of biomass can be inverted in the sea; the pyramid of numbers can be inverted for a tree.
  • Phosphorus cycle has no significant gaseous phase; carbon and nitrogen cycles are gaseous.
  • Nitrosomonas: ammonia to nitrite; Nitrobacter: nitrite to nitrate; Pseudomonas: denitrification.
  • Pioneer species: lichens on bare rock (xerarch); phytoplankton in water (hydrarch).
  • Lichens are a mutualistic association and an indicator of sulphur dioxide pollution.

For Mains

  • Dimensions: ecological (cascades, resilience), economic (ecosystem services such as pollination, water purification, soil formation), social (forest-dependent livelihoods), policy (landscape-level planning rather than species-by-species protection).
  • Keywords: trophic cascade, ecosystem services, resilience, carrying capacity, keystone species, edge effect, habitat fragmentation, succession, nutrient loading.
  • Value-addition: the Yellowstone wolf reintroduction (1995) as an illustration of top-down control; the Millennium Ecosystem Assessment (2005) classification of ecosystem services into provisioning, regulating, cultural and supporting services; fragmentation creating artificial edges that favour generalists over interior species.

Common Traps

Trap #1: 'Energy is recycled in an ecosystem'
Energy flows one way and is lost as heat at each step. It is nutrients that are recycled. A statement saying energy is recycled is always wrong.
Trap #2: 'All ecological pyramids are upright'
Only the pyramid of energy is always upright. The pyramid of numbers is inverted for a single tree with many insects; the pyramid of biomass is inverted in many marine ecosystems.
Trap #3: Mixing up nitrification and denitrification bacteria
Nitrosomonas and Nitrobacter make nitrate (nitrification). Pseudomonas and Thiobacillus return nitrogen to the air (denitrification). Rhizobium and Azotobacter fix atmospheric nitrogen. Statement questions swap these names.

Practice

Prelims

UPSC Practice · Prelims GS I Qeco-1

Consider the following statements:

  1. The pyramid of energy in an ecosystem can be inverted when the producers are very small and reproduce rapidly.
  2. The pyramid of biomass in many marine ecosystems is inverted.

Which of the statements given above is/are correct?

  1. A 1 only
  2. B 2 only
  3. C Both 1 and 2
  4. D Neither 1 nor 2
Solution

Statement 1 is incorrect — the pyramid of energy is always upright, because energy is lost as heat at every transfer. Statement 2 is correct — in the sea, phytoplankton have a small standing biomass at any moment but reproduce very quickly, so the standing biomass of consumers such as fish can exceed theirs. The trap is to attach the “small, fast-reproducing producers” logic to energy instead of biomass.

Answer: B

UPSC-pattern practice question
UPSC Practice · Prelims GS I Qeco-2

Which one of the following organisms converts nitrite into nitrate in the soil?

  1. A Rhizobium
  2. B Azotobacter
  3. C Nitrobacter
  4. D Anabaena
Solution

Nitrobacter oxidises nitrite to nitrate, the second step of nitrification (the first step, ammonia to nitrite, is done by Nitrosomonas). Rhizobium, Azotobacter and Anabaena are all nitrogen fixers — they convert atmospheric nitrogen into ammonia, which is a different step of the cycle.

Answer: C

UPSC-pattern practice question
UPSC Practice · Prelims GS I Qeco-3

Consider the following pairs of interactions and examples:

  1. Mutualism — lichen
  2. Commensalism — orchid growing on a mango branch
  3. Amensalism — Penicillium inhibiting the growth of bacteria
  4. Parasitism — cuckoo laying eggs in a crow’s nest

How many of the pairs given above are correctly matched?

  1. A Only one
  2. B Only two
  3. C Only three
  4. D All four
Solution

All four are correct. A lichen is a mutualistic partnership of a fungus and an alga. The epiphytic orchid benefits from support and light while the mango is unaffected (commensalism). Penicillium harms bacteria without benefiting itself (amensalism). The cuckoo’s behaviour is brood parasitism, a form of parasitism. The trap is to assume a “how many” question must have at least one wrong pair.

Answer: D

UPSC-pattern practice question

Mains

UPSC Practice · Mains GS III 10 marks · 150 words Qeco-m1

“Energy flows, but nutrients cycle.” Explain this statement and discuss its significance for the management of ecosystems.

Solution

Introduction: Every ecosystem runs on two processes: a one-way flow of energy from the sun through trophic levels, and the repeated cycling of nutrients between living and non-living components.

Body:

  • Energy flow: producers capture a small share of sunlight; about 10% passes to each higher level (Lindeman); the rest is lost as heat. Hence short food chains and upright energy pyramids.
  • Nutrient cycling: carbon, nitrogen and phosphorus move through producers, consumers and decomposers back to air, water and soil; decomposition is the key link.
  • Management implications:
    • Protecting top predators and keystone species preserves top-down control (trophic cascades).
    • Excess nitrogen and phosphorus from fertilisers and sewage overload cycles, causing eutrophication.
    • Burning fossil carbon faster than sinks absorb it drives climate change.
    • Healthy soils and decomposer communities sustain agricultural productivity.

Conclusion: Because energy cannot be recycled and nutrients cannot be created, ecosystem management must keep food webs intact and nutrient cycles balanced — the scientific basis of conservation and pollution control.

UPSC-pattern practice question

Quick Revision

PointOne-liner
EcosystemCoined by A.G. Tansley, 1935
NPPGPP minus respiration
Ten per cent lawLindeman, 1942
Main energy pathwayAquatic: grazing chain; terrestrial: detritus chain
Always uprightPyramid of energy
Sedimentary cyclePhosphorus, sulphur
NitrificationNitrosomonas then Nitrobacter
DenitrificationPseudomonas, Thiobacillus
PioneersLichens (rock), phytoplankton (water)
EcotoneTransition zone; edge effect raises diversity

Key Takeaways

Key Takeaways
  1. Energy flows one way and is lost at each step; nutrients are recycled — this single idea explains pyramids, food chain length and pollution impacts.
  2. Prelims tests exceptions: inverted pyramids, the phosphorus cycle, and which microbe does which step of the nitrogen cycle.
  3. Succession, keystone species and the edge effect are the concepts that link ecology to conservation answers in Mains.
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